3D Slicer Training
3DSlicer is a visualization and analysis software dedicated to image data. Its intuitive GUI allows for using advanced image processing algorithm through open source libraries. The design originally focused on research projects directly or indirectly related to imaging. 3DSlicer is now used world-wide, in a variety of projects running from medical imaging to astronomy.
The objectives of this course will interest users of scientific visualization tools, but also developers willing to customize the interface.
Objectives
- Loading/Saving data (DICOM, models,…)
- Mastering the 3DSlicer’s interface
- Using segmentation and registration algorithms
- Writing simple python scripts
Prerequisites
Basic knowledge in imaging (volume, processing)
Program
- 3DSlicer interface overview
- Usual imaging software
- 3DSlicer specific functionalities
- Format support (DICOM, mesh,…)
- Non-exhaustive list of supported formats
- Loading, visualization and export
- Segmentation and registration algorithms
- Manual and semi-automatic segmentation tools
- Quantitative analysis of data
- Region growing algorithm
- Manual and semi-automatic registration tools
- Python Scripting
- 3DSlicer GUI modification through simple scripts
- Basic image processing using NumPy
This training course will be taught in English. Course notes are also in English.
Participants are asked to bring a laptop computer for this training session.
The instructor will communicate all the specifications required to each participants before the training session.
Lunch is included when the training is at Kitware’s premises
Kitware SAS is registered as a training center in France
Practical Information
Duration: 1 day
Next training Date: June 17, 2021
Location: Online
Price: 800€
Company Training
All our training can be offered on site with a custom agenda. Contact us for more information.
Meet the instructor
Thibault Pelletier is R&D Engineer – Lead Developer at Kitware Lyon.
At Kitware, Thibault is responsible for software development around VTK, Qt, ITK and Slicer. Thibault also leads several projects related to Slicer development and customization